Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904084.1_cds_XP_016454220.1_48269
CDS Infomation

[gene=LOC107778475] [db_xref=GeneID:107778475] [protein=50S ribosomal protein L1-like] [protein_id=XP_016454220.1] [location=complement(join(14549..14629,15573..15619,15936..16023,16133..16237,16317..16355,17801..17865,20653..20758,20846..20887,21966..22043,25245..25826))] [gbkey=CDS]
Sequence

ATGGCGGCCTTCGAACTGCTCCATCAAGCTCGCCGCCACTGCTCCTACAAAACCCCATCT
CACTTTTCTCCTCTTCTCCGCTCTCATTTCCACCGATTTCTCTCCTCTTCATCATCCCAA
TCACAACCCGAATCCACAGAAAACCCGATTCCAGTCCAACCCGTTTCCTACAAACCCAAG
GATCCTCCGGAAACCCCATCTACAGAAACCACGTCTCAAGCTTCTACCCGTCCCGAGTCG
AATACCAAAGACCCTGTTAACGCCGATGGTAAGACGTGGACACGGGAGGATCTCCGGTAC
TTGAAGGATGCACCAAAAATAACTCCGGTTTCTTACCCGACCCGAGTGGCTCCGTTACCT
GAGGATCGGGTTGAAGAGGATGGGGGAGTGGAAGCTAAGGGTGATGAGGAGCTGGAGAGA
GAGAGAAGAAGAATTGAGGCACAAAAAAGGGCGGCAATGAGGAGGGTTTTGAATGTTGAA
GAGGAAATGGTTCCGTTTCCTACATTGGTTAACGCGAAGAGTGATGATGAAAAGAAGAAA
AAAGCTGTTTATGATCTTAAAGAGGCCATTCGCCTCGTAAAGGCTAATGCCAAGAAGAAG
TTTGATGAAACTTTGGAAGCTCATGTTGTTTTGACTTCTGATATGCGCCGAAGTGATCTG
AAGCTTGAAGGTACAGTAGCTGTTCCTCATGGGTTTGGCAAGGTATATCGTATTGCTGTT
TTTGCTGAAGGAGCTGCTGCTGATGAAGCCCGAGAAGCAGGAGCTGATGTTGTTGGTGGT
TTGGAGCTCATAGAGAATATCAAGAGTGGAAATGTGAAGATTGATTTTGACAAATGTTTT
TCCACTCATGCAATGATGCCGAACTTGAGACAGATTGCCAAGTACTTGAGACAATTGATG
CCAGATACTAAAAAAGGTACTGTTACCAAAGATATCACAAAAGCAGTGAAAGAAGCAAAA
CAAGGTGTACCTTTCAAAAAAGACAAAACTGCAATTGTGCATGTAGGAATTGGGAAGGTA
AGTTTTCAAGATGAGGCACTATGTGAAAACGTTGGTGCATTTGTACACGAACTTTTGCGT
CAGAAGCCTGCTGGCTTAAAAAAGAGCTCAAAATATGCTGGTTATGTGAATACAGTCCAT
ATATGCAGCACGATGGGTCCATCTTTCCCCGTGTCAATACAGTCGTTATCGATTGCAGCG
GACCGCCATGCAAGGAAGTATCTTCAATTATAG

Peptide Sequence

PEP ID

XP_016454220.1
PEP Infomation

PREDICTED: 50S ribosomal protein L1-like [Nicotiana tabacum]
Sequence

MAAFELLHQARRHCSYKTPSHFSPLLRSHFHRFLSSSSSQSQPESTENPIPVQPVSYKPK
DPPETPSTETTSQASTRPESNTKDPVNADGKTWTREDLRYLKDAPKITPVSYPTRVAPLP
EDRVEEDGGVEAKGDEELERERRRIEAQKRAAMRRVLNVEEEMVPFPTLVNAKSDDEKKK
KAVYDLKEAIRLVKANAKKKFDETLEAHVVLTSDMRRSDLKLEGTVAVPHGFGKVYRIAV
FAEGAAADEAREAGADVVGGLELIENIKSGNVKIDFDKCFSTHAMMPNLRQIAKYLRQLM
PDTKKGTVTKDITKAVKEAKQGVPFKKDKTAIVHVGIGKVSFQDEALCENVGAFVHELLR
QKPAGLKKSSKYAGYVNTVHICSTMGPSFPVSIQSLSIAADRHARKYLQL

Transcript Sequence

Gene sequence data has not been registered.